You sure you want to do this? Gonna take a lot of gelcoat to hide the maroon. Then a LOT of wet sanding and buffing to get a nice shiny surface. I would think about a two part auto paint. Paint will last longer. You still don't have to remove the maroon, nor prime it. Just a good 320 sanding to prep.
No need to take all the gel coat off and it doesn't need to be sealed either. You can paint right over the gel coat after its been sanded. If there are imperfections in the surface a primer should be used.
The maroon won't "bleed" through. Its just that gelcoat has a thicker requirement to be able to hide whatever color is underneath it. Production gelcoat has a lot of specs from the manufacturer. One of which is "hide". Even over plain fiberglass the hide factor will probably be at least 10-12 mils. Over a darker color it might be more. You will have to spray the gelcoat on in three passes of about 6 mils to get to the reccomended thickness of 18-20 wet. Spraying any thicker can cause porosity and never finish well. Spraying any thinner might not allow enough mass to cure properly. Remember that gelcoat shrinks at it cures. So 18 wet might give you 12ish dry. After you wetsand it and buff it you may be below the hide capabilities in the gelcoat. With paint you need much less thickness, somewhere around 5 or 6 mils. If you spray the gelcoat to thick it will be subject to cracking and crazing because it does not flex very well. Make sure you use a mil gauge when spraying. I agree that paint is harder to fix but it is tougher to start with. It won't crack as easily and will stand up to UV degradation much longer. You will also never get as good a finish spraying gelcoat and finishing it as you can spraying it on a mold where air can't inhibit the cure even if you use a surfacing agent or spray PVA over it to keep the air off. I have seen a lot of gelcoat (over the last 40 years) sprayed on the surface doing large repairs and within a short amount of time it begins to yellow much faster than the original finish in the repaired areas. Show me any fiberglass boat over three years old thats been in the sun and I'll show you every gelcoat repair.
You could always just have that portion wrapped. If your not painting yourself it will prolly be cheaper and faster. Just an idea. You can take them the colors that your new interior will be and they can match them up exact.
I will be the one spraying be it paint or gelcoat. What do you mean by wrapped?
There are many grafic companies that wrap boats now a days check this out
http://www.youtube.com/watch?v=pDTFbBRUjas&feature=related
They do everything from custom to plain jain. Had a few friends do this recently and it looks great. I will be doing this over the winter when Things die down a bit and I have a bit of extra cash laying around (hopefully) lol.