Re: Will both batteries charge?
ok after hours(ok maybe not hours) of research your alternator specs from 50-65 amps, as Don stated that is more then enough to keep both of your batteries fully charged no issue at all, the only thing you should be concerned with is the state of your batteries, I always like to tell folks at the beginning of the boating season to charge your batteries fully, then take them and have them load tested at the local auto parts store,this should give you a good idea as to the condition of your batteries, if you have time having the alternator tested is always a good idea as well same deal take it down to the local auto parts store and you will get a good idea of the alternators condition, niether of these tests cost you anything.
Remember you are talking about a lot of electricity so be careful batteries are fairly effective welders.
a decent 20-30 minute run with your battery select switch on both will charge your batteries nicely.