Re: Alternator
I have a 600 CCA starting battery and then I have a marine deep cycle 225 ah tied in parallel with all my stereo equipment hooked to it.
Curious why you are running these in parallel. They should be separated and only connected together while the engine is running. Use a battery switch where you can put them in parallel with a switch or even better to use an ACR. Generally, its not a good idea to run different battery types and capacities in parallel. Personally, I prefer not to run identical batteries in parallel either.
Don't use set screw ring terminals in a marine environment. Worst thing you can do. Go here and order cables that are crimped and have shrink sleave on the connector.
http://stores.ebay.com/Genuinedealz
I am probably one of the old timers Mark is referring to. I am also an EE. Don't get a high output alternator unless you actually have to have it.
What current draw do you currently measure when your stereo is operating? What size battery is your deep discharge battery. Without knowing these, its pretty pointless suggesting alternator sizes. If you have a 70 amp hour battery for your deep discharge, you are way better off charging it slower with your current alternator. By the way, you should never discharge your battery more than 50% so you really shouldn't be discharging it more than 35 amp/hr. Can you see why it doesn't really make sense to get an alternator that is more than you already have? Now, if you have a set of Trojan 6V 200Amp/hour batteries in your boat at $200/each I would be saying something completely different.
Many suggest never charging a battery more than C/8 where C is = to the capacity of the battery. This is if you want your battery to last a long time. If you don't mind changing batteries out more often, then you can go with the higher output charger and charge quicker. Your choice on the "cost" of that convenience factor.