I also glued my deck down but I did use some screws, the main thing is to countersink them and cover with sealer, and any holes you have to drill for seat mounting must be sealed. I didn't do this, but it would probably be a good idea to over-drill the hole and fill it with epoxy and then drill the epoxy for the hole for the screw.
Another thing when using foam, what I did instead of installing the deck, drilling holes to pour foam and then re-inserting and gluing the circular pieces that have to be cut out, I foamed it before installing the deck and cut the top of the excess foam off level with the stringers, less worry about the expanding foam popping anything loose, and you can verify full coverage/expansion. You could (I didn't) glass over the foam with epoxy to keep it from absorbing moisture too.